Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Parapedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Parapedobacter |
| Species | Parapedobacter composti |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 29 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | non-spore-forming |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1152102 bp
Thymine Count
1157457 bp
Guanine Count
1159480 bp
Cytosine Count
1152985 bp
Genome Length
4622024 bp
Protein-coding Genes
3993 genes
Non-Coding Genes
47 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| merr hth family regulatory protein | SAMN05421747_102330 | Not Available | Positive | 1115315 - 1115617 | 11340.7 |
| mobilisation protein (mobc) | SAMN05421747_102331 | Not Available | Positive | 1115916 - 1116296 | 14078.4 |
| relaxase/mobilisation nuclease domain-containing protein | SAMN05421747_102332 | Not Available | Positive | 1116286 - 1117248 | 36419.9 |
| hypothetical protein | SAMN05421747_102333 | Not Available | Positive | 1117261 - 1117890 | 24373.6 |
| membrane protein yfho | SAMN05421747_102334 | Not Available | Negative | 1118019 - 1120484 | 92523.8 |
| methyltransferase domain-containing protein | SAMN05421747_102335 | Not Available | Negative | 1120582 - 1121304 | 28204.8 |
| hypothetical protein | SAMN05421747_102336 | Not Available | Positive | 1121354 - 1121614 | 9901.01 |
| hypothetical protein | SAMN05421747_102337 | Not Available | Negative | 1121486 - 1121806 | 11239.2 |
| glycine c-acetyltransferase | SAMN05421747_102338 | Not Available | Positive | 1122100 - 1123374 | 46742.8 |
| dna-binding transcriptional regulator, acrr family | SAMN05421747_102339 | Not Available | Positive | 1123472 - 1124116 | 24690.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
