Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Parapedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Parapedobacter |
| Species | Parapedobacter composti |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 29 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | non-spore-forming |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1152102 bp
Thymine Count
1157457 bp
Guanine Count
1159480 bp
Cytosine Count
1152985 bp
Genome Length
4622024 bp
Protein-coding Genes
3993 genes
Non-Coding Genes
47 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| protein of unknown function | SAMN05421747_102320 | Not Available | Positive | 1107061 - 1107537 | 16965.7 |
| dihydropteroate synthase | SAMN05421747_102321 | Not Available | Positive | 1107538 - 1108362 | 29794.3 |
| methionyl-trna synthetase | SAMN05421747_102322 | Not Available | Negative | 1108374 - 1110452 | 78001.2 |
| putative oxidoreductase | SAMN05421747_102323 | Not Available | Positive | 1110551 - 1110958 | 14244.1 |
| ubiquinone/menaquinone biosynthesis c-methylase ubie | SAMN05421747_102324 | Not Available | Positive | 1110963 - 1111616 | 24037.7 |
| Trna-glu | Not Available | Not Available | Positive | 1111737 - 1111811 | Not Available |
| site-specific recombinase xerd | SAMN05421747_102326 | Not Available | Positive | 1112008 - 1113366 | 51523.2 |
| hypothetical protein | SAMN05421747_102327 | Not Available | Positive | 1113383 - 1114441 | 40677.6 |
| hypothetical protein | SAMN05421747_102328 | Not Available | Positive | 1114512 - 1114718 | 8229.92 |
| nucleotidyl transferase of unknown function | SAMN05421747_102329 | Not Available | Positive | 1114708 - 1115205 | 18870.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
