Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Parapedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Parapedobacter |
| Species | Parapedobacter composti |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 29 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | non-spore-forming |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1152102 bp
Thymine Count
1157457 bp
Guanine Count
1159480 bp
Cytosine Count
1152985 bp
Genome Length
4622024 bp
Protein-coding Genes
3993 genes
Non-Coding Genes
47 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| glutamyl-trna synthetase | SAMN05421747_102310 | Not Available | Negative | 1097459 - 1098346 | 33877.6 |
| acetyl esterase/lipase | SAMN05421747_102311 | Not Available | Negative | 1098498 - 1099373 | 31423.2 |
| alanine dehydrogenase | SAMN05421747_102312 | Not Available | Negative | 1099425 - 1100636 | 44118.9 |
| ndp-sugar epimerase, includes udp-glcnac-inverting 4,6-dehydratase flaa1 and capsular polysaccharide biosynthesis protein epsc | SAMN05421747_102313 | Not Available | Positive | 1100803 - 1102722 | 72446.9 |
| tetratricopeptide repeat-containing protein | SAMN05421747_102314 | Not Available | Positive | 1102804 - 1103484 | 25086.8 |
| 6,7-dimethyl-8-ribityllumazine synthase | SAMN05421747_102315 | Not Available | Positive | 1103507 - 1103998 | 17366.7 |
| hypothetical protein | SAMN05421747_102316 | Not Available | Positive | 1104316 - 1105065 | 27487.5 |
| ribosome-associated heat shock protein hsp15 | SAMN05421747_102317 | Not Available | Negative | 1105062 - 1105466 | 15107.0 |
| 2,3,4,5-tetrahydropyridine-2-carboxylate n-succinyltransferase | SAMN05421747_102318 | Not Available | Positive | 1105565 - 1106383 | 29955.4 |
| l-threonylcarbamoyladenylate synthase | SAMN05421747_102319 | Not Available | Positive | 1106387 - 1106977 | 21562.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
