Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Parapedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Parapedobacter |
| Species | Parapedobacter composti |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 29 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | non-spore-forming |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1152102 bp
Thymine Count
1157457 bp
Guanine Count
1159480 bp
Cytosine Count
1152985 bp
Genome Length
4622024 bp
Protein-coding Genes
3993 genes
Non-Coding Genes
47 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| carboxymethylenebutenolidase | SAMN05421747_102300 | Not Available | Negative | 1088670 - 1089521 | 30704.5 |
| uncharacterized metal-binding protein yced, duf177 family | SAMN05421747_102301 | Not Available | Positive | 1089684 - 1090217 | 20315.1 |
| large subunit ribosomal protein l32 | SAMN05421747_102302 | Not Available | Positive | 1090227 - 1090418 | 7176.65 |
| glycerol-3-phosphate acyltransferase plsx | SAMN05421747_102303 | Not Available | Positive | 1090581 - 1091519 | 33480.6 |
| 3-oxoacyl-[acyl-carrier-protein] synthase-3 | SAMN05421747_102304 | Not Available | Positive | 1091529 - 1092524 | 35702.8 |
| acetyl-coa carboxylase biotin carboxyl carrier protein | SAMN05421747_102305 | Not Available | Positive | 1092611 - 1093081 | 16859.2 |
| acetyl-coa carboxylase, biotin carboxylase subunit | SAMN05421747_102306 | Not Available | Positive | 1093113 - 1094453 | 49382.2 |
| sec-independent protein translocase protein tatc | SAMN05421747_102307 | Not Available | Positive | 1094497 - 1095411 | 34494.4 |
| ribose 5-phosphate isomerase b | SAMN05421747_102308 | Not Available | Positive | 1095423 - 1095863 | 15753.6 |
| peptidase family m28 | SAMN05421747_102309 | Not Available | Positive | 1095886 - 1097457 | 57892.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
