Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Parapedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Parapedobacter |
| Species | Parapedobacter composti |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 29 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | non-spore-forming |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1152102 bp
Thymine Count
1157457 bp
Guanine Count
1159480 bp
Cytosine Count
1152985 bp
Genome Length
4622024 bp
Protein-coding Genes
3993 genes
Non-Coding Genes
47 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | SAMN05421747_102290 | Not Available | Negative | 1076434 - 1077870 | 52525.6 |
| protein of unknown function | SAMN05421747_102291 | Not Available | Negative | 1078280 - 1080985 | 100546.0 |
| protein of unknown function | SAMN05421747_102292 | Not Available | Negative | 1081151 - 1082080 | 34142.5 |
| gliding-associated putative abc transporter substrate-binding component gldg | SAMN05421747_102293 | Not Available | Negative | 1082067 - 1083614 | 57297.1 |
| abc-2 type transport system permease protein | SAMN05421747_102294 | Not Available | Negative | 1083611 - 1084333 | 26404.8 |
| abc-2 type transport system atp-binding protein | SAMN05421747_102295 | Not Available | Negative | 1084344 - 1085273 | 34181.5 |
| hypothetical protein | SAMN05421747_102296 | Not Available | Negative | 1085387 - 1085866 | 18720.5 |
| transglutaminase-like superfamily protein | SAMN05421747_102297 | Not Available | Positive | 1085942 - 1086796 | 32554.2 |
| hypothetical protein | SAMN05421747_102298 | Not Available | Negative | 1086810 - 1087886 | 38421.0 |
| hypothetical protein | SAMN05421747_102299 | Not Available | Positive | 1088012 - 1088689 | 26358.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
