Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Parapedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Parapedobacter |
| Species | Parapedobacter composti |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 29 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | non-spore-forming |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1152102 bp
Thymine Count
1157457 bp
Guanine Count
1159480 bp
Cytosine Count
1152985 bp
Genome Length
4622024 bp
Protein-coding Genes
3993 genes
Non-Coding Genes
47 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| uracil phosphoribosyltransferase | SAMN05421747_10179 | Not Available | Negative | 98108 - 98755 | 23938.1 |
| excinuclease abc subunit b | SAMN05421747_10180 | Not Available | Positive | 98875 - 100926 | 77750.4 |
| hypothetical protein | SAMN05421747_10181 | Not Available | Positive | 101155 - 102177 | 40228.9 |
| glycosyltransferase, gt2 family | SAMN05421747_10182 | Not Available | Positive | 102199 - 104433 | 85188.1 |
| glycosyltransferase involved in cell wall bisynthesis | SAMN05421747_10183 | Not Available | Negative | 104442 - 105275 | 32567.9 |
| hypothetical protein | SAMN05421747_10184 | Not Available | Negative | 105279 - 106247 | 38370.9 |
| glycosyltransferase, gt2 family | SAMN05421747_10185 | Not Available | Positive | 106416 - 107348 | 35102.4 |
| stealth protein cr1, conserved region 1 | SAMN05421747_10186 | Not Available | Negative | 107350 - 108342 | 38647.4 |
| glycosyl transferase family 2 | SAMN05421747_10187 | Not Available | Negative | 108344 - 109177 | 31859.6 |
| hypothetical protein | SAMN05421747_10188 | Not Available | Negative | 109378 - 109902 | 19773.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
