Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Parapedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Parapedobacter |
| Species | Parapedobacter composti |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 29 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | non-spore-forming |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1152102 bp
Thymine Count
1157457 bp
Guanine Count
1159480 bp
Cytosine Count
1152985 bp
Genome Length
4622024 bp
Protein-coding Genes
3993 genes
Non-Coding Genes
47 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| mg2 domain-containing protein | SAMN05421747_102250 | Not Available | Positive | 1032556 - 1038597 | 227365.0 |
| topoisomerase-4 subunit b | SAMN05421747_102251 | Not Available | Positive | 1038666 - 1040546 | 70860.4 |
| formyltetrahydrofolate deformylase | SAMN05421747_102252 | Not Available | Positive | 1040554 - 1041396 | 31037.6 |
| cupin domain-containing protein | SAMN05421747_102253 | Not Available | Negative | 1041365 - 1041721 | 12918.5 |
| 23s rrna (cytosine1962-c5)-methyltransferase | SAMN05421747_102254 | Not Available | Negative | 1041744 - 1042643 | 33973.7 |
| phospholipid/cholesterol/gamma-hch transport system atp-binding protein | SAMN05421747_102255 | Not Available | Negative | 1042692 - 1043444 | 28139.1 |
| phospholipid/cholesterol/gamma-hch transport system permease protein | SAMN05421747_102256 | Not Available | Negative | 1043464 - 1044198 | 25927.5 |
| hypothetical protein | SAMN05421747_102257 | Not Available | Positive | 1044229 - 1044327 | 3714.45 |
| hypothetical protein | SAMN05421747_102258 | Not Available | Positive | 1044346 - 1045065 | 26382.6 |
| phage shock protein pspc (stress-responsive transcriptional regulator) | SAMN05421747_102259 | Not Available | Positive | 1045077 - 1045649 | 21566.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
