Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Parapedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Parapedobacter |
| Species | Parapedobacter composti |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 29 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | non-spore-forming |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1152102 bp
Thymine Count
1157457 bp
Guanine Count
1159480 bp
Cytosine Count
1152985 bp
Genome Length
4622024 bp
Protein-coding Genes
3993 genes
Non-Coding Genes
47 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| predicted zn-dependent peptidase | SAMN05421747_102220 | Not Available | Positive | 994500 - 995837 | 50070.4 |
| predicted zn-dependent peptidase | SAMN05421747_102221 | Not Available | Positive | 995869 - 997914 | 73887.9 |
| nad(p)h-dependent fmn reductase | SAMN05421747_102222 | Not Available | Negative | 997942 - 998463 | 19890.8 |
| chromosome partitioning protein | SAMN05421747_102223 | Not Available | Positive | 998649 - 999446 | 29268.3 |
| chromosome partitioning protein, parb family | SAMN05421747_102224 | Not Available | Positive | 999453 - 1000373 | 34487.6 |
| hypothetical protein | SAMN05421747_102225 | Not Available | Positive | 1000373 - 1001119 | 28566.2 |
| 4-hydroxy-tetrahydrodipicolinate reductase | SAMN05421747_102226 | Not Available | Positive | 1001209 - 1001958 | 27489.6 |
| signal peptidase i | SAMN05421747_102227 | Not Available | Positive | 1001991 - 1003415 | 55000.4 |
| pyridoxine 5-phosphate synthase | SAMN05421747_102228 | Not Available | Negative | 1003421 - 1004146 | 26616.6 |
| tigr00159 family protein | SAMN05421747_102229 | Not Available | Positive | 1004200 - 1004982 | 29153.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
