Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Parapedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Parapedobacter |
| Species | Parapedobacter composti |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 29 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | non-spore-forming |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1152102 bp
Thymine Count
1157457 bp
Guanine Count
1159480 bp
Cytosine Count
1152985 bp
Genome Length
4622024 bp
Protein-coding Genes
3993 genes
Non-Coding Genes
47 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| putative binding domain-containing protein, n-terminal | SAMN05421747_102210 | Not Available | Negative | 981666 - 982946 | 45278.6 |
| starch-binding associating with outer membrane | SAMN05421747_102211 | Not Available | Negative | 982963 - 984750 | 68426.2 |
| tonb-linked outer membrane protein, susc/raga family | SAMN05421747_102212 | Not Available | Negative | 984764 - 987997 | 121942.0 |
| deor family transcriptional regulator, aga operon transcriptional repressor | SAMN05421747_102213 | Not Available | Positive | 988332 - 989099 | 28036.2 |
| hypothetical protein | SAMN05421747_102214 | Not Available | Negative | 989112 - 989462 | 13623.3 |
| glycosyltransferase involved in cell wall bisynthesis | SAMN05421747_102215 | Not Available | Positive | 989516 - 990742 | 45907.9 |
| arylsulfatase a | SAMN05421747_102216 | Not Available | Positive | 990749 - 992206 | 54131.3 |
| membrane dipeptidase | SAMN05421747_102217 | Not Available | Negative | 992203 - 993447 | 45547.2 |
| hypothetical protein | SAMN05421747_102218 | Not Available | Negative | 993566 - 993733 | 6195.57 |
| helix-turn-helix | SAMN05421747_102219 | Not Available | Positive | 993873 - 994100 | 8438.15 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
