Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Parapedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Parapedobacter |
| Species | Parapedobacter composti |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 29 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | non-spore-forming |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1152102 bp
Thymine Count
1157457 bp
Guanine Count
1159480 bp
Cytosine Count
1152985 bp
Genome Length
4622024 bp
Protein-coding Genes
3993 genes
Non-Coding Genes
47 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| gliding motility-associated protein gldc | SAMN05421747_102200 | Not Available | Negative | 971054 - 971404 | 13509.0 |
| hypothetical protein | SAMN05421747_102201 | Not Available | Negative | 971438 - 971686 | 9462.33 |
| atp-dependent rna helicase rhle | SAMN05421747_102202 | Not Available | Negative | 971683 - 973014 | 49661.3 |
| glycerophosphoryl diester phosphodiesterase | SAMN05421747_102203 | Not Available | Negative | 973072 - 973968 | 33595.8 |
| alpha-ribazole phosphatase/probable phosphoglycerate mutase | SAMN05421747_102204 | Not Available | Negative | 973979 - 974581 | 22444.8 |
| sugar (pentulose or hexulose) kinase | SAMN05421747_102205 | Not Available | Negative | 974578 - 976011 | 52072.9 |
| autoinducer 2 (ai-2) kinase | SAMN05421747_102206 | Not Available | Negative | 976015 - 977460 | 53468.5 |
| d-3-phosphoglycerate dehydrogenase | SAMN05421747_102207 | Not Available | Negative | 977463 - 978473 | 37589.0 |
| polyol permease family | SAMN05421747_102208 | Not Available | Negative | 978507 - 979775 | 46237.1 |
| calcineurin-like phosphoesterase | SAMN05421747_102209 | Not Available | Negative | 980019 - 981578 | 58054.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
