Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Parapedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Parapedobacter |
| Species | Parapedobacter composti |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 29 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | non-spore-forming |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1152102 bp
Thymine Count
1157457 bp
Guanine Count
1159480 bp
Cytosine Count
1152985 bp
Genome Length
4622024 bp
Protein-coding Genes
3993 genes
Non-Coding Genes
47 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| 6-phosphogluconate dehydrogenase | SAMN05421747_102190 | Not Available | Negative | 962430 - 963884 | 53097.8 |
| glycosyl hydrolases family 43 | SAMN05421747_102191 | Not Available | Positive | 964025 - 965029 | 37939.9 |
| peptidase family m28 | SAMN05421747_102192 | Not Available | Positive | 965055 - 966044 | 36412.5 |
| dtdp-4-dehydrorhamnose reductase | SAMN05421747_102193 | Not Available | Positive | 966078 - 966995 | 33242.9 |
| acyl-coa hydrolase | SAMN05421747_102194 | Not Available | Positive | 967012 - 967536 | 19735.8 |
| conserved repeat domain-containing protein | SAMN05421747_102195 | Not Available | Positive | 967938 - 968147 | 7420.59 |
| conserved repeat domain-containing protein | SAMN05421747_102196 | Not Available | Positive | 968105 - 969037 | 33520.7 |
| hypothetical protein | SAMN05421747_102197 | Not Available | Negative | 969069 - 969281 | 7690.84 |
| protein of unknown function | SAMN05421747_102198 | Not Available | Negative | 969331 - 970302 | 35357.2 |
| predicted rna-binding protein, contains pua-like domain | SAMN05421747_102199 | Not Available | Negative | 970594 - 971001 | 15732.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
