Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Parapedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Parapedobacter |
| Species | Parapedobacter composti |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 29 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | non-spore-forming |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1152102 bp
Thymine Count
1157457 bp
Guanine Count
1159480 bp
Cytosine Count
1152985 bp
Genome Length
4622024 bp
Protein-coding Genes
3993 genes
Non-Coding Genes
47 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| methylated-dna-[protein]-cysteine s-methyltransferase | SAMN05421747_10169 | Not Available | Negative | 82749 - 83234 | 17634.2 |
| predicted arabinose efflux permease, mfs family | SAMN05421747_10170 | Not Available | Positive | 83263 - 84486 | 44099.8 |
| lipoic acid synthetase | SAMN05421747_10171 | Not Available | Negative | 84537 - 85418 | 33196.1 |
| glycosyl hydrolases family 16 | SAMN05421747_10172 | Not Available | Negative | 85460 - 86317 | 32642.1 |
| hypothetical protein | SAMN05421747_10173 | Not Available | Negative | 86356 - 87318 | 34210.2 |
| starch-binding associating with outer membrane | SAMN05421747_10174 | Not Available | Negative | 87315 - 88838 | 56401.6 |
| tonb-linked outer membrane protein, susc/raga family | SAMN05421747_10175 | Not Available | Negative | 88852 - 91974 | 112897.0 |
| ligand-binding sensor domain-containing protein | SAMN05421747_10176 | Not Available | Negative | 92201 - 95203 | 115210.0 |
| hexosaminidase | SAMN05421747_10177 | Not Available | Positive | 95219 - 97486 | 85102.2 |
| hypothetical protein | SAMN05421747_10178 | Not Available | Negative | 97504 - 97977 | 17601.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
