Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Parapedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Parapedobacter |
| Species | Parapedobacter composti |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 29 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | non-spore-forming |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1152102 bp
Thymine Count
1157457 bp
Guanine Count
1159480 bp
Cytosine Count
1152985 bp
Genome Length
4622024 bp
Protein-coding Genes
3993 genes
Non-Coding Genes
47 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | SAMN05421747_102160 | Not Available | Negative | 937975 - 938259 | 10484.5 |
| prolyl oligopeptidase | SAMN05421747_102161 | Not Available | Negative | 938272 - 940428 | 79597.3 |
| udp-2,3-diacylglucosamine hydrolase | SAMN05421747_102162 | Not Available | Positive | 940496 - 941251 | 29084.8 |
| camp-binding domain of crp or a regulatory subunit of camp-dependent protein kinases | SAMN05421747_102163 | Not Available | Positive | 941251 - 941814 | 21590.3 |
| quaternary ammonium compound-resistance protein suge | SAMN05421747_102164 | Not Available | Positive | 941893 - 942222 | 11659.7 |
| peptide chain release factor 1 | SAMN05421747_102165 | Not Available | Positive | 942353 - 943426 | 40512.3 |
| Trna-asp | Not Available | Not Available | Positive | 943496 - 943569 | Not Available |
| hypothetical protein | SAMN05421747_102167 | Not Available | Positive | 943857 - 944021 | 6522.99 |
| hypothetical protein | SAMN05421747_102168 | Not Available | Positive | 944267 - 944488 | 7923.55 |
| dna-binding response regulator, lytr/algr family | SAMN05421747_102169 | Not Available | Negative | 944565 - 945326 | 29055.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
