Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Parapedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Parapedobacter |
| Species | Parapedobacter composti |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 29 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | non-spore-forming |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1152102 bp
Thymine Count
1157457 bp
Guanine Count
1159480 bp
Cytosine Count
1152985 bp
Genome Length
4622024 bp
Protein-coding Genes
3993 genes
Non-Coding Genes
47 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | SAMN05421747_102140 | Not Available | Positive | 916476 - 917321 | 33022.8 |
| peptidyl-prolyl cis-trans isomerase sura | SAMN05421747_102141 | Not Available | Positive | 917322 - 918689 | 52173.0 |
| hypothetical protein | SAMN05421747_102142 | Not Available | Negative | 918749 - 919612 | 32690.3 |
| cysteinyl-trna synthetase | SAMN05421747_102143 | Not Available | Negative | 919617 - 921080 | 55410.3 |
| gtp-binding protein | SAMN05421747_102144 | Not Available | Negative | 921099 - 922400 | 48875.0 |
| gh3 auxin-responsive promoter | SAMN05421747_102145 | Not Available | Negative | 922453 - 923967 | 58001.6 |
| lipopolysaccharide export system atp-binding protein | SAMN05421747_102146 | Not Available | Negative | 923973 - 924707 | 27806.7 |
| single-stranded-dna-specific exonuclease | SAMN05421747_102147 | Not Available | Negative | 924732 - 926432 | 62827.7 |
| metallo-beta-lactamase superfamily protein | SAMN05421747_102148 | Not Available | Positive | 926567 - 927349 | 29171.1 |
| hypothetical protein | SAMN05421747_102149 | Not Available | Negative | 927357 - 927569 | 7966.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
