Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Parapedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Parapedobacter |
| Species | Parapedobacter composti |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 29 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | non-spore-forming |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1152102 bp
Thymine Count
1157457 bp
Guanine Count
1159480 bp
Cytosine Count
1152985 bp
Genome Length
4622024 bp
Protein-coding Genes
3993 genes
Non-Coding Genes
47 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| protein of unknown function | SAMN05421747_102120 | Not Available | Negative | 893105 - 894418 | 48120.7 |
| protein of unknown function | SAMN05421747_102121 | Not Available | Negative | 894435 - 895739 | 48732.2 |
| substrate import-associated zinc metallohydrolase lipoprotein | SAMN05421747_102122 | Not Available | Negative | 895870 - 896727 | 31999.1 |
| susd family protein | SAMN05421747_102123 | Not Available | Negative | 896753 - 898249 | 56577.9 |
| tonb-linked outer membrane protein, susc/raga family | SAMN05421747_102124 | Not Available | Negative | 898249 - 901923 | 136062.0 |
| fecr protein | SAMN05421747_102125 | Not Available | Negative | 902089 - 903258 | 44607.7 |
| hypothetical protein | SAMN05421747_102126 | Not Available | Negative | 903602 - 904105 | 20742.2 |
| rna polymerase sigma-70 factor, ecf subfamily | SAMN05421747_102127 | Not Available | Negative | 904238 - 904777 | 20607.9 |
| 3',5'-cyclic amp phosphodiesterase cpda | SAMN05421747_102128 | Not Available | Negative | 904892 - 905974 | 40859.5 |
| glycerate dehydrogenase | SAMN05421747_102129 | Not Available | Negative | 906005 - 906964 | 34697.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
