Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Parapedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Parapedobacter |
| Species | Parapedobacter composti |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 29 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | non-spore-forming |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1152102 bp
Thymine Count
1157457 bp
Guanine Count
1159480 bp
Cytosine Count
1152985 bp
Genome Length
4622024 bp
Protein-coding Genes
3993 genes
Non-Coding Genes
47 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | SAMN05421747_10270 | Not Available | Negative | 840291 - 841103 | 30389.1 |
| tonb dependent receptor | SAMN05421747_10271 | Not Available | Negative | 841116 - 842189 | 41413.2 |
| choline/glycine/proline betaine transport protein | SAMN05421747_10272 | Not Available | Positive | 842346 - 843266 | 34776.8 |
| hypothetical protein | SAMN05421747_10273 | Not Available | Negative | 843232 - 844590 | 49756.5 |
| hypothetical protein | SAMN05421747_10274 | Not Available | Negative | 844615 - 846522 | 71735.9 |
| hypothetical protein | SAMN05421747_10275 | Not Available | Negative | 846554 - 847288 | 27449.3 |
| signal transduction histidine kinase | SAMN05421747_10276 | Not Available | Positive | 847672 - 849738 | 78122.4 |
| dna-binding response regulator, narl/fixj family, contains rec and hth domains | SAMN05421747_10277 | Not Available | Negative | 849701 - 850330 | 22780.8 |
| hypothetical protein | SAMN05421747_10278 | Not Available | Positive | 850475 - 850741 | 10408.7 |
| hypothetical protein | SAMN05421747_10279 | Not Available | Negative | 850732 - 850926 | 7684.21 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
