Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Parapedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Parapedobacter |
| Species | Parapedobacter composti |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 29 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | non-spore-forming |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1152102 bp
Thymine Count
1157457 bp
Guanine Count
1159480 bp
Cytosine Count
1152985 bp
Genome Length
4622024 bp
Protein-coding Genes
3993 genes
Non-Coding Genes
47 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| protein of unknown function | SAMN05421747_10159 | Not Available | Positive | 69864 - 71195 | 48756.3 |
| hypothetical protein | SAMN05421747_10160 | Not Available | Negative | 71259 - 71432 | 6727.56 |
| hypothetical protein | SAMN05421747_10161 | Not Available | Positive | 71694 - 73295 | 57285.3 |
| hypothetical protein | SAMN05421747_10162 | Not Available | Positive | 73302 - 74216 | 33554.0 |
| rna polymerase sigma factor, sigma-70 family | SAMN05421747_10163 | Not Available | Positive | 74232 - 74864 | 25085.6 |
| ferric-dicitrate binding protein ferr, regulates iron transport through sigma-19 | SAMN05421747_10164 | Not Available | Positive | 74906 - 75913 | 38363.0 |
| tonb-linked outer membrane protein, susc/raga family | SAMN05421747_10165 | Not Available | Positive | 75921 - 79571 | 133619.0 |
| starch-binding associating with outer membrane | SAMN05421747_10166 | Not Available | Positive | 79571 - 80998 | 53175.7 |
| hypothetical protein | SAMN05421747_10167 | Not Available | Positive | 81054 - 81905 | 32268.5 |
| hypothetical protein | SAMN05421747_10168 | Not Available | Positive | 82186 - 82650 | 17029.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
