Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Parapedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Parapedobacter |
| Species | Parapedobacter composti |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 29 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | non-spore-forming |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1152102 bp
Thymine Count
1157457 bp
Guanine Count
1159480 bp
Cytosine Count
1152985 bp
Genome Length
4622024 bp
Protein-coding Genes
3993 genes
Non-Coding Genes
47 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | SAMN05421747_10250 | Not Available | Negative | 822900 - 823427 | 19088.9 |
| hypothetical protein | SAMN05421747_10251 | Not Available | Positive | 823489 - 823824 | 13018.7 |
| hypothetical protein | SAMN05421747_10252 | Not Available | Positive | 823876 - 824799 | 34390.4 |
| short-chain dehydrogenase | SAMN05421747_10253 | Not Available | Positive | 824786 - 825514 | 25380.8 |
| hypothetical protein | SAMN05421747_10254 | Not Available | Positive | 825538 - 826068 | 19295.4 |
| 1-acyl-sn-glycerol-3-phosphate acyltransferase | SAMN05421747_10255 | Not Available | Positive | 826155 - 826886 | 27570.2 |
| glycosyltransferase, catalytic subunit of cellulose synthase and poly-beta-1,6-n-acetylglucosamine synthase | SAMN05421747_10256 | Not Available | Negative | 826879 - 828012 | 41776.8 |
| hypothetical protein | SAMN05421747_10257 | Not Available | Negative | 827993 - 828988 | 37582.4 |
| protein tonb | SAMN05421747_10258 | Not Available | Positive | 829167 - 830003 | 30121.4 |
| crossover junction endodeoxyribonuclease ruvc | SAMN05421747_10259 | Not Available | Positive | 830114 - 830677 | 20391.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
