Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Parapedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Parapedobacter |
| Species | Parapedobacter composti |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 29 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | non-spore-forming |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1152102 bp
Thymine Count
1157457 bp
Guanine Count
1159480 bp
Cytosine Count
1152985 bp
Genome Length
4622024 bp
Protein-coding Genes
3993 genes
Non-Coding Genes
47 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | SAMN05421747_10240 | Not Available | Negative | 810613 - 810828 | 8411.13 |
| outer membrane protein beta-barrel domain-containing protein | SAMN05421747_10241 | Not Available | Positive | 810963 - 811559 | 21454.7 |
| succinate dehydrogenase / fumarate reductase cytochrome b subunit | SAMN05421747_10242 | Not Available | Positive | 811712 - 812485 | 29562.2 |
| succinate dehydrogenase / fumarate reductase flavoprotein subunit | SAMN05421747_10243 | Not Available | Positive | 812540 - 814471 | 71968.3 |
| succinate dehydrogenase / fumarate reductase iron-sulfur subunit | SAMN05421747_10244 | Not Available | Positive | 814553 - 815323 | 28112.6 |
| hamp domain-containing protein | SAMN05421747_10245 | Not Available | Positive | 815429 - 819205 | 142744.0 |
| hypothetical protein | SAMN05421747_10246 | Not Available | Negative | 819229 - 820173 | 35498.7 |
| gdpmannose 4,6-dehydratase | SAMN05421747_10247 | Not Available | Negative | 820249 - 821391 | 43227.4 |
| glucose-1-phosphate thymidylyltransferase | SAMN05421747_10248 | Not Available | Negative | 821394 - 822269 | 32130.9 |
| protein of unknown function | SAMN05421747_10249 | Not Available | Negative | 822345 - 822872 | 19132.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
