Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Parapedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Parapedobacter |
| Species | Parapedobacter composti |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 29 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | non-spore-forming |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1152102 bp
Thymine Count
1157457 bp
Guanine Count
1159480 bp
Cytosine Count
1152985 bp
Genome Length
4622024 bp
Protein-coding Genes
3993 genes
Non-Coding Genes
47 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | SAMN05421747_10230 | Not Available | Positive | 801962 - 802387 | 16379.8 |
| sulfate permease, sulp family | SAMN05421747_10231 | Not Available | Positive | 802564 - 804210 | 58724.9 |
| carbonic anhydrase | SAMN05421747_10232 | Not Available | Positive | 804234 - 804899 | 24743.7 |
| 1-pyrroline-5-carboxylate dehydrogenase | SAMN05421747_10233 | Not Available | Negative | 804987 - 806621 | 60380.8 |
| uncharacterized damage-inducible protein dinb (forms a four-helix bundle) | SAMN05421747_10234 | Not Available | Positive | 806762 - 807220 | 17574.8 |
| peptide-methionine (s)-s-oxide reductase | SAMN05421747_10235 | Not Available | Negative | 807230 - 807871 | 24268.7 |
| d-arabinose 1-dehydrogenase, zn-dependent alcohol dehydrogenase family | SAMN05421747_10236 | Not Available | Negative | 807910 - 808911 | 35557.9 |
| superoxide dismutase, fe-mn family | SAMN05421747_10237 | Not Available | Negative | 808988 - 809596 | 22274.9 |
| trna(adenine34) deaminase | SAMN05421747_10238 | Not Available | Negative | 809762 - 810235 | 17048.5 |
| pp_00653 | SAMN05421747_10239 | Not Available | Negative | 810268 - 810606 | Not Available |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
