Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Parapedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Parapedobacter |
| Species | Parapedobacter composti |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 29 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | non-spore-forming |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1152102 bp
Thymine Count
1157457 bp
Guanine Count
1159480 bp
Cytosine Count
1152985 bp
Genome Length
4622024 bp
Protein-coding Genes
3993 genes
Non-Coding Genes
47 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| acetyl esterase/lipase | SAMN05421747_10210 | Not Available | Negative | 770031 - 770870 | 31049.1 |
| protein of unknown function duf86 | SAMN05421747_10211 | Not Available | Negative | 770881 - 771105 | 8509.2 |
| iduronate 2-sulfatase | SAMN05421747_10212 | Not Available | Negative | 771144 - 772703 | 57897.8 |
| l-alanine-dl-glutamate epimerase | SAMN05421747_10213 | Not Available | Negative | 772723 - 773931 | 44923.1 |
| arabinan endo-1,5-alpha-l-arabinosidase | SAMN05421747_10214 | Not Available | Negative | 774026 - 775126 | 40158.1 |
| bnr repeat-like domain-containing protein | SAMN05421747_10215 | Not Available | Negative | 775167 - 776348 | 43945.3 |
| glycosyl hydrolases family 43 | SAMN05421747_10216 | Not Available | Negative | 776404 - 777369 | 36567.4 |
| arylsulfatase | SAMN05421747_10217 | Not Available | Negative | 777585 - 779063 | 55823.1 |
| glycosyl hydrolase family 115 | SAMN05421747_10218 | Not Available | Negative | 779098 - 782070 | 112567.0 |
| arylsulfatase a | SAMN05421747_10219 | Not Available | Negative | 782091 - 783569 | 55463.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
