Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Parapedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Parapedobacter |
| Species | Parapedobacter composti |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 29 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | non-spore-forming |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1152102 bp
Thymine Count
1157457 bp
Guanine Count
1159480 bp
Cytosine Count
1152985 bp
Genome Length
4622024 bp
Protein-coding Genes
3993 genes
Non-Coding Genes
47 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| protein of unknown function | SAMN05421747_101619 | Not Available | Positive | 760352 - 760819 | 18168.7 |
| hypothetical protein | SAMN05421747_1021 | Not Available | Positive | 760862 - 761014 | 5437.56 |
| predicted dna-binding protein, mmcq/yjbr family | SAMN05421747_1022 | Not Available | Negative | 761121 - 761474 | 13105.7 |
| molecular chaperone dnak | SAMN05421747_1023 | Not Available | Positive | 761909 - 763834 | 69209.6 |
| hypothetical protein | SAMN05421747_1024 | Not Available | Negative | 764023 - 764727 | 26513.6 |
| hypothetical protein | SAMN05421747_1025 | Not Available | Positive | 764961 - 765158 | 7084.71 |
| dtdp-glucose pyrophosphorylase | SAMN05421747_1026 | Not Available | Negative | 765223 - 766134 | 34300.6 |
| hypothetical protein | SAMN05421747_1027 | Not Available | Negative | 766199 - 767743 | 56212.3 |
| 2,4-dienoyl-coa reductase | SAMN05421747_1028 | Not Available | Negative | 767806 - 768882 | 38664.2 |
| glycosyl hydrolases family 43 | SAMN05421747_1029 | Not Available | Negative | 768918 - 770024 | 41324.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
