Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Parapedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Parapedobacter |
| Species | Parapedobacter composti |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 29 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | non-spore-forming |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1152102 bp
Thymine Count
1157457 bp
Guanine Count
1159480 bp
Cytosine Count
1152985 bp
Genome Length
4622024 bp
Protein-coding Genes
3993 genes
Non-Coding Genes
47 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | SAMN05421747_101589 | Not Available | Negative | 735587 - 735970 | 14860.3 |
| hypothetical protein | SAMN05421747_101590 | Not Available | Negative | 735982 - 736089 | 4201.35 |
| hypothetical protein | SAMN05421747_101591 | Not Available | Positive | 736347 - 736502 | 5828.41 |
| transposase, mutator family | SAMN05421747_101592 | Not Available | Negative | 736511 - 736702 | 7338.77 |
| transposase, mutator family | SAMN05421747_101593 | Not Available | Negative | 736699 - 736986 | 10909.2 |
| rtec protein | SAMN05421747_101594 | Not Available | Negative | 737124 - 737951 | 33248.1 |
| cation efflux family protein | SAMN05421747_101595 | Not Available | Negative | 738150 - 738944 | 29429.4 |
| iron complex outermembrane recepter protein | SAMN05421747_101596 | Not Available | Negative | 738948 - 741119 | 81783.5 |
| arsenite transporter, acr3 family | SAMN05421747_101597 | Not Available | Negative | 741583 - 742614 | 38214.3 |
| hypothetical protein | SAMN05421747_101598 | Not Available | Negative | 742618 - 742743 | 4971.95 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
