Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Parapedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Parapedobacter |
| Species | Parapedobacter composti |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 29 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | non-spore-forming |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1152102 bp
Thymine Count
1157457 bp
Guanine Count
1159480 bp
Cytosine Count
1152985 bp
Genome Length
4622024 bp
Protein-coding Genes
3993 genes
Non-Coding Genes
47 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | SAMN05421747_101579 | Not Available | Negative | 724168 - 724353 | 7025.29 |
| arac-type dna-binding protein | SAMN05421747_101580 | Not Available | Negative | 724423 - 725205 | 30605.8 |
| rtec protein | SAMN05421747_101581 | Not Available | Negative | 725274 - 725498 | 9133.75 |
| rtec protein | SAMN05421747_101582 | Not Available | Negative | 725522 - 726100 | 23224.0 |
| cd2+/zn2+-exporting atpase | SAMN05421747_101583 | Not Available | Negative | 726490 - 728523 | 74027.6 |
| hypothetical protein | SAMN05421747_101584 | Not Available | Negative | 728529 - 729017 | 19044.7 |
| hypothetical protein | SAMN05421747_101585 | Not Available | Negative | 729107 - 729247 | 5441.51 |
| fur family transcriptional regulator, ferric uptake regulator | SAMN05421747_101586 | Not Available | Negative | 729295 - 729717 | 16459.7 |
| rnd family efflux transporter, mfp subunit | SAMN05421747_101587 | Not Available | Negative | 729730 - 731010 | 46268.6 |
| cobalt-zinc-cadmium resistance protein czca | SAMN05421747_101588 | Not Available | Negative | 731096 - 735454 | 161368.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
