Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Parapedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Parapedobacter |
| Species | Parapedobacter composti |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 29 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | non-spore-forming |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1152102 bp
Thymine Count
1157457 bp
Guanine Count
1159480 bp
Cytosine Count
1152985 bp
Genome Length
4622024 bp
Protein-coding Genes
3993 genes
Non-Coding Genes
47 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| small subunit ribosomal protein s7 | SAMN05421747_101568 | Not Available | Negative | 711829 - 712296 | 17840.9 |
| ssu ribosomal protein s12p | SAMN05421747_101569 | Not Available | Negative | 712315 - 712722 | 14850.2 |
| calcineurin-like phosphoesterase | SAMN05421747_101570 | Not Available | Negative | 713023 - 716079 | 118859.0 |
| rtec protein | SAMN05421747_101571 | Not Available | Positive | 716351 - 717199 | 33387.0 |
| helix-turn-helix domain-containing protein | SAMN05421747_101572 | Not Available | Positive | 717462 - 717797 | 13412.3 |
| protein of unknown function | SAMN05421747_101573 | Not Available | Positive | 717858 - 719279 | 54298.9 |
| dna topoisomerase-3 | SAMN05421747_101574 | Not Available | Positive | 719383 - 721467 | 77990.3 |
| rtec protein | SAMN05421747_101576 | Not Available | Negative | 721630 - 722457 | 33140.9 |
| hypothetical protein | SAMN05421747_101577 | Not Available | Negative | 722482 - 723114 | 24011.1 |
| nad(p)h dehydrogenase (quinone) | SAMN05421747_101578 | Not Available | Negative | 723117 - 723971 | 31768.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
