Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Parapedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Parapedobacter |
| Species | Parapedobacter composti |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 29 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | non-spore-forming |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1152102 bp
Thymine Count
1157457 bp
Guanine Count
1159480 bp
Cytosine Count
1152985 bp
Genome Length
4622024 bp
Protein-coding Genes
3993 genes
Non-Coding Genes
47 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| glutaryl-coa dehydrogenase | SAMN05421747_101548 | Not Available | Positive | 690535 - 691884 | 50146.0 |
| yidc/oxa1 family membrane protein insertase | SAMN05421747_101549 | Not Available | Negative | 691949 - 693769 | 68812.0 |
| ctp synthase | SAMN05421747_101550 | Not Available | Negative | 693783 - 695402 | 59685.2 |
| imidazolonepropionase | SAMN05421747_101551 | Not Available | Positive | 695674 - 698661 | 109226.0 |
| imidazolonepropionase | SAMN05421747_101552 | Not Available | Positive | 698675 - 699982 | 46889.8 |
| large subunit ribosomal protein l19 | SAMN05421747_101553 | Not Available | Negative | 700069 - 700416 | 13055.9 |
| Trna-pro | Not Available | Not Available | Positive | 700572 - 700646 | Not Available |
| predicted phosphodiesterase | SAMN05421747_101555 | Not Available | Negative | 700823 - 701593 | 28790.1 |
| arsenite transporter, acr3 family | SAMN05421747_101556 | Not Available | Negative | 701711 - 702796 | 39255.4 |
| hypothetical protein | SAMN05421747_101557 | Not Available | Negative | 702933 - 703406 | 17350.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
