Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Parapedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Parapedobacter |
| Species | Parapedobacter composti |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 29 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | non-spore-forming |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1152102 bp
Thymine Count
1157457 bp
Guanine Count
1159480 bp
Cytosine Count
1152985 bp
Genome Length
4622024 bp
Protein-coding Genes
3993 genes
Non-Coding Genes
47 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| frg domain-containing protein | SAMN05421747_101518 | Not Available | Positive | 663610 - 664350 | 28683.2 |
| uncharacterized conserved protein yece, duf72 family | SAMN05421747_101519 | Not Available | Negative | 664334 - 665071 | 28499.8 |
| hypothetical protein | SAMN05421747_101520 | Not Available | Negative | 665083 - 665331 | 9373.94 |
| dna-binding response regulator, narl/fixj family, contains rec and hth domains | SAMN05421747_101521 | Not Available | Negative | 665348 - 665995 | 24052.2 |
| phosphoheptose isomerase | SAMN05421747_101522 | Not Available | Positive | 666437 - 668380 | 71533.6 |
| d,d-heptose 1,7-bisphosphate phosphatase | SAMN05421747_101523 | Not Available | Positive | 668349 - 668915 | 20440.6 |
| d-beta-d-heptose 7-phosphate kinase / d-beta-d-heptose 1-phosphate adenosyltransferase | SAMN05421747_101524 | Not Available | Positive | 668918 - 670405 | 54160.8 |
| adp-heptose:lps heptosyltransferase | SAMN05421747_101525 | Not Available | Positive | 670413 - 671528 | 40704.0 |
| adp-heptose:lps heptosyltransferase | SAMN05421747_101526 | Not Available | Negative | 671457 - 672470 | 37088.1 |
| glycosyltransferase, gt2 family | SAMN05421747_101527 | Not Available | Negative | 672482 - 673456 | 37014.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
