Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Parapedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Parapedobacter |
| Species | Parapedobacter composti |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 29 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | non-spore-forming |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1152102 bp
Thymine Count
1157457 bp
Guanine Count
1159480 bp
Cytosine Count
1152985 bp
Genome Length
4622024 bp
Protein-coding Genes
3993 genes
Non-Coding Genes
47 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | SAMN05421747_101508 | Not Available | Negative | 656149 - 656397 | 9167.17 |
| cardiolipin synthase | SAMN05421747_101509 | Not Available | Positive | 656527 - 657720 | 45687.5 |
| uncharacterized conserved protein, duf2267 family | SAMN05421747_101510 | Not Available | Positive | 657897 - 658325 | 16171.2 |
| hypothetical protein | SAMN05421747_101511 | Not Available | Positive | 658340 - 658576 | 8850.52 |
| conserved hypothetical protein | SAMN05421747_101512 | Not Available | Positive | 658684 - 659145 | 17245.3 |
| hypothetical protein | SAMN05421747_101513 | Not Available | Positive | 659191 - 659679 | 18058.7 |
| hypothetical protein | SAMN05421747_101514 | Not Available | Positive | 659701 - 660180 | 18339.1 |
| pas domain s-box-containing protein | SAMN05421747_101515 | Not Available | Positive | 660305 - 662302 | 74304.1 |
| response regulator receiver domain-containing protein | SAMN05421747_101516 | Not Available | Positive | 662334 - 662696 | 13206.8 |
| ferritin-like metal-binding protein ycie | SAMN05421747_101517 | Not Available | Negative | 662786 - 663301 | 19289.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
