Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Parapedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Parapedobacter |
| Species | Parapedobacter composti |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 29 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | non-spore-forming |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1152102 bp
Thymine Count
1157457 bp
Guanine Count
1159480 bp
Cytosine Count
1152985 bp
Genome Length
4622024 bp
Protein-coding Genes
3993 genes
Non-Coding Genes
47 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | SAMN05421747_101498 | Not Available | Positive | 648940 - 649194 | 9493.37 |
| dna topoisomerase-1 | SAMN05421747_101499 | Not Available | Positive | 649148 - 650203 | 40257.9 |
| predicted purr-regulated permease perm | SAMN05421747_101500 | Not Available | Negative | 650215 - 651330 | 39838.1 |
| rna polymerase sigma-70 factor, ecf subfamily | SAMN05421747_101501 | Not Available | Negative | 651314 - 651826 | 20054.0 |
| hypothetical protein | SAMN05421747_101502 | Not Available | Negative | 651862 - 652002 | 5305.5 |
| membrane protein | SAMN05421747_101503 | Not Available | Negative | 652270 - 653226 | 35686.3 |
| hypothetical protein | SAMN05421747_101504 | Not Available | Negative | 653272 - 653448 | 6405.22 |
| hypothetical protein | SAMN05421747_101505 | Not Available | Positive | 653608 - 653928 | 11759.9 |
| ribonuclease bn, trna processing enzyme | SAMN05421747_101506 | Not Available | Positive | 654155 - 654892 | 27121.8 |
| hypothetical protein | SAMN05421747_101507 | Not Available | Positive | 654995 - 656152 | 43358.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
