Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Parapedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Parapedobacter |
| Species | Parapedobacter composti |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 29 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | non-spore-forming |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1152102 bp
Thymine Count
1157457 bp
Guanine Count
1159480 bp
Cytosine Count
1152985 bp
Genome Length
4622024 bp
Protein-coding Genes
3993 genes
Non-Coding Genes
47 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| cytochrome c oxidase accessory protein fixg | SAMN05421747_101458 | Not Available | Positive | 606254 - 607615 | 51098.8 |
| fixh protein | SAMN05421747_101459 | Not Available | Positive | 607632 - 607832 | 7676.58 |
| hypothetical protein | SAMN05421747_101460 | Not Available | Positive | 607829 - 608521 | 24716.9 |
| hypothetical protein | SAMN05421747_101461 | Not Available | Positive | 608546 - 608671 | 4690.72 |
| efflux transporter, outer membrane factor (omf) lipoprotein, nodt family | SAMN05421747_101462 | Not Available | Negative | 608764 - 610227 | 54565.1 |
| hydrophobic/amphiphilic exporter-1, hae1 family | SAMN05421747_101463 | Not Available | Negative | 610230 - 613400 | 115627.0 |
| membrane fusion protein, multidrug efflux system | SAMN05421747_101464 | Not Available | Negative | 613489 - 614667 | 42922.4 |
| n-formylglutamate amidohydrolase | SAMN05421747_101465 | Not Available | Positive | 614818 - 615612 | 30824.7 |
| conserved hypothetical protein | SAMN05421747_101466 | Not Available | Positive | 615609 - 617459 | 69842.2 |
| glutathione synthase | SAMN05421747_101467 | Not Available | Positive | 617470 - 618468 | 36988.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
