Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Parapedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Parapedobacter |
| Species | Parapedobacter composti |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 29 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | non-spore-forming |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1152102 bp
Thymine Count
1157457 bp
Guanine Count
1159480 bp
Cytosine Count
1152985 bp
Genome Length
4622024 bp
Protein-coding Genes
3993 genes
Non-Coding Genes
47 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| pas domain s-box-containing protein | SAMN05421747_101448 | Not Available | Positive | 595804 - 596997 | 44399.2 |
| camp-binding domain of crp or a regulatory subunit of camp-dependent protein kinases | SAMN05421747_101449 | Not Available | Positive | 597000 - 598064 | 40487.6 |
| d-lactate dehydrogenase | SAMN05421747_101450 | Not Available | Positive | 598192 - 598599 | 14885.0 |
| oxygen-independent coproporphyrinogen-3 oxidase | SAMN05421747_101451 | Not Available | Positive | 598596 - 599960 | 50660.9 |
| cu+-exporting atpase | SAMN05421747_101452 | Not Available | Positive | 599957 - 602356 | 87431.5 |
| cytochrome oxidase maturation protein, cbb3-type | SAMN05421747_101453 | Not Available | Positive | 602353 - 602520 | 6164.3 |
| hypothetical protein | SAMN05421747_101454 | Not Available | Negative | 602509 - 602811 | 11869.8 |
| cytochrome c oxidase cbb3-type subunit i/ii | SAMN05421747_101455 | Not Available | Positive | 603034 - 605166 | 80940.8 |
| hypothetical protein | SAMN05421747_101456 | Not Available | Positive | 605186 - 605386 | 7862.56 |
| cytochrome c oxidase cbb3-type subunit 3 | SAMN05421747_101457 | Not Available | Positive | 605383 - 606213 | 30580.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
