Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Parapedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Parapedobacter |
| Species | Parapedobacter composti |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 29 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | non-spore-forming |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1152102 bp
Thymine Count
1157457 bp
Guanine Count
1159480 bp
Cytosine Count
1152985 bp
Genome Length
4622024 bp
Protein-coding Genes
3993 genes
Non-Coding Genes
47 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| lysophospholipase l1 | SAMN05421747_101438 | Not Available | Positive | 584410 - 585081 | 25321.5 |
| cbs domain-containing protein | SAMN05421747_101439 | Not Available | Negative | 585078 - 585506 | 16115.5 |
| hypothetical protein | SAMN05421747_101440 | Not Available | Negative | 585592 - 586017 | 16041.3 |
| hypothetical protein | SAMN05421747_101441 | Not Available | Negative | 586111 - 586737 | 24284.3 |
| protein of unknown function | SAMN05421747_101442 | Not Available | Positive | 586814 - 587719 | 34364.9 |
| dna repair protein recn (recombination protein n) | SAMN05421747_101443 | Not Available | Positive | 587729 - 589393 | 62314.4 |
| enoyl-[acyl-carrier protein] reductase i | SAMN05421747_101444 | Not Available | Positive | 589448 - 590266 | 29665.5 |
| hypothetical protein | SAMN05421747_101445 | Not Available | Negative | 590331 - 590750 | 15854.8 |
| atp-dependent clp protease atp-binding subunit clpc | SAMN05421747_101446 | Not Available | Negative | 591300 - 593849 | 95029.9 |
| atp-binding cassette protein, chvd family | SAMN05421747_101447 | Not Available | Positive | 594005 - 595804 | 67451.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
