Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Parapedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Parapedobacter |
| Species | Parapedobacter composti |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 29 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | non-spore-forming |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1152102 bp
Thymine Count
1157457 bp
Guanine Count
1159480 bp
Cytosine Count
1152985 bp
Genome Length
4622024 bp
Protein-coding Genes
3993 genes
Non-Coding Genes
47 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| sh3 domain-containing protein | SAMN05421747_101418 | Not Available | Negative | 562189 - 563424 | 45261.6 |
| n4-(beta-n-acetylglucosaminyl)-l-asparaginase | SAMN05421747_101419 | Not Available | Positive | 563516 - 564544 | 36602.9 |
| peptide-methionine (s)-s-oxide reductase | SAMN05421747_101420 | Not Available | Positive | 564606 - 565115 | 19342.7 |
| hypothetical protein | SAMN05421747_101421 | Not Available | Negative | 565128 - 565730 | 21550.8 |
| topoisomerase-4 subunit a | SAMN05421747_101422 | Not Available | Negative | 565742 - 568501 | 102263.0 |
| mechanosensitive ion channel | SAMN05421747_101423 | Not Available | Negative | 568575 - 569588 | 37578.8 |
| hypothetical protein | SAMN05421747_101424 | Not Available | Negative | 569692 - 569907 | 7887.71 |
| hypothetical protein | SAMN05421747_101425 | Not Available | Negative | 569912 - 571183 | 45869.9 |
| iron complex outermembrane recepter protein | SAMN05421747_101426 | Not Available | Negative | 571189 - 573498 | 85088.8 |
| hypothetical protein | SAMN05421747_101427 | Not Available | Negative | 573572 - 573940 | 13962.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
