Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Parapedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Parapedobacter |
| Species | Parapedobacter composti |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 29 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | non-spore-forming |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1152102 bp
Thymine Count
1157457 bp
Guanine Count
1159480 bp
Cytosine Count
1152985 bp
Genome Length
4622024 bp
Protein-coding Genes
3993 genes
Non-Coding Genes
47 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | SAMN05421747_1552 | Not Available | Positive | 4614507 - 4614845 | 13134.7 |
| hypothetical protein | SAMN05421747_1561 | Not Available | Negative | 4614901 - 4615036 | 4981.23 |
| putative transposase | SAMN05421747_1562 | Not Available | Negative | 4615033 - 4615896 | 32802.4 |
| transposase | SAMN05421747_1563 | Not Available | Negative | 4615893 - 4616168 | 10548.8 |
| is4 transposase | SAMN05421747_1571 | Not Available | Negative | 4616246 - 4617424 | 44988.4 |
| putative transposase | SAMN05421747_1581 | Not Available | Positive | 4617598 - 4617864 | 10102.3 |
| putative transposase | SAMN05421747_1582 | Not Available | Positive | 4617948 - 4618760 | 32056.5 |
| udpglucose 6-dehydrogenase | SAMN05421747_1591 | Not Available | Negative | 4618775 - 4619947 | 43355.2 |
| hypothetical protein | SAMN05421747_1601 | Not Available | Negative | 4619948 - 4620996 | 37317.1 |
| dtdp-glucose 4,6-dehydratase | SAMN05421747_1611 | Not Available | Negative | 4620997 - 4622022 | 39015.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
