Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Parapedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Parapedobacter |
| Species | Parapedobacter composti |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 29 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | non-spore-forming |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1152102 bp
Thymine Count
1157457 bp
Guanine Count
1159480 bp
Cytosine Count
1152985 bp
Genome Length
4622024 bp
Protein-coding Genes
3993 genes
Non-Coding Genes
47 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | SAMN05421747_1511 | Not Available | Negative | 4607034 - 4607414 | 15097.0 |
| rhs repeat-associated core domain-containing protein | SAMN05421747_1512 | Not Available | Negative | 4607440 - 4608639 | 43653.0 |
| putative transposase | SAMN05421747_1521 | Not Available | Positive | 4608640 - 4609093 | 17395.6 |
| hypothetical protein | SAMN05421747_1522 | Not Available | Negative | 4609145 - 4609594 | 18266.9 |
| hypothetical protein | SAMN05421747_1523 | Not Available | Negative | 4609604 - 4610315 | 26569.4 |
| transcriptional regulator, hxlr family | SAMN05421747_1531 | Not Available | Positive | 4610453 - 4610800 | 12865.8 |
| hypothetical protein | SAMN05421747_1532 | Not Available | Positive | 4610816 - 4610920 | 3834.66 |
| hypothetical protein | SAMN05421747_1533 | Not Available | Negative | 4611053 - 4611977 | 36291.5 |
| hypothetical protein | SAMN05421747_1541 | Not Available | Negative | 4611978 - 4613477 | 56833.9 |
| hypothetical protein | SAMN05421747_1551 | Not Available | Positive | 4613606 - 4614493 | 33186.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
