Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Parapedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Parapedobacter |
| Species | Parapedobacter composti |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 29 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | non-spore-forming |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1152102 bp
Thymine Count
1157457 bp
Guanine Count
1159480 bp
Cytosine Count
1152985 bp
Genome Length
4622024 bp
Protein-coding Genes
3993 genes
Non-Coding Genes
47 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | SAMN05421747_1472 | Not Available | Negative | 4598931 - 4599155 | 8750.41 |
| protein of unknown function | SAMN05421747_1473 | Not Available | Negative | 4599430 - 4599735 | 11876.2 |
| rhs repeat-associated core domain-containing protein | SAMN05421747_1474 | Not Available | Negative | 4599735 - 4600967 | 45119.7 |
| hypothetical protein | SAMN05421747_1481 | Not Available | Positive | 4601041 - 4602054 | 37244.5 |
| hypothetical protein | SAMN05421747_1482 | Not Available | Positive | 4602494 - 4603030 | 20301.7 |
| nad(p)-dependent dehydrogenase, short-chain alcohol dehydrogenase family | SAMN05421747_1491 | Not Available | Positive | 4603383 - 4604108 | 26770.0 |
| acetyltransferase (gnat) family protein | SAMN05421747_1492 | Not Available | Positive | 4604139 - 4604597 | 17784.1 |
| small multidrug resistance pump | SAMN05421747_1493 | Not Available | Negative | 4604629 - 4604796 | 5686.36 |
| hypothetical protein | SAMN05421747_1494 | Not Available | Negative | 4604990 - 4605067 | 3019.71 |
| transposase | SAMN05421747_1501 | Not Available | Negative | 4605142 - 4606767 | 62666.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
