Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Parapedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Parapedobacter |
| Species | Parapedobacter composti |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 29 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | non-spore-forming |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1152102 bp
Thymine Count
1157457 bp
Guanine Count
1159480 bp
Cytosine Count
1152985 bp
Genome Length
4622024 bp
Protein-coding Genes
3993 genes
Non-Coding Genes
47 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| udpglucose 6-dehydrogenase | SAMN05421747_1441 | Not Available | Positive | 4590984 - 4591187 | 7810.27 |
| udp-n-acetylglucosamine 2-epimerase (non-hydrolysing) | SAMN05421747_1442 | Not Available | Positive | 4591210 - 4592349 | 42661.6 |
| udp-n-acetyl-d-mannosaminuronic acid dehydrogenase | SAMN05421747_1443 | Not Available | Positive | 4592362 - 4593579 | 45181.6 |
| dtdp-glucose 4,6-dehydratase | SAMN05421747_1444 | Not Available | Positive | 4593569 - 4593685 | 4379.52 |
| dna replication protein dnac | SAMN05421747_1451 | Not Available | Negative | 4593782 - 4594513 | 27456.2 |
| transposase | SAMN05421747_1452 | Not Available | Negative | 4594534 - 4596096 | 60622.6 |
| transposase is66 family protein | SAMN05421747_1461 | Not Available | Negative | 4596336 - 4596827 | 19055.1 |
| transposase | SAMN05421747_1462 | Not Available | Negative | 4596980 - 4598485 | 57797.5 |
| hypothetical protein | SAMN05421747_1463 | Not Available | Negative | 4598546 - 4598702 | 5905.22 |
| hypothetical protein | SAMN05421747_1471 | Not Available | Negative | 4598703 - 4598803 | 3981.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
