Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Parapedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Parapedobacter |
| Species | Parapedobacter composti |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 29 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | non-spore-forming |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1152102 bp
Thymine Count
1157457 bp
Guanine Count
1159480 bp
Cytosine Count
1152985 bp
Genome Length
4622024 bp
Protein-coding Genes
3993 genes
Non-Coding Genes
47 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | SAMN05421747_1413 | Not Available | Negative | 4583641 - 4583793 | 5612.68 |
| hypothetical protein | SAMN05421747_1414 | Not Available | Negative | 4583837 - 4584180 | 13400.5 |
| rtec protein | SAMN05421747_1421 | Not Available | Positive | 4584369 - 4584773 | 16089.9 |
| hypothetical protein | SAMN05421747_1422 | Not Available | Positive | 4584854 - 4584976 | 4828.81 |
| camp-binding domain of crp or a regulatory subunit of camp-dependent protein kinases | SAMN05421747_1423 | Not Available | Positive | 4585087 - 4585656 | 22016.3 |
| predicted oxidoreductase | SAMN05421747_1424 | Not Available | Positive | 4585737 - 4586708 | 35247.4 |
| hypothetical protein | SAMN05421747_1425 | Not Available | Positive | 4586718 - 4587923 | 45789.3 |
| dna replication protein dnac | SAMN05421747_1431 | Not Available | Negative | 4588175 - 4589008 | 31750.1 |
| transposase | SAMN05421747_1432 | Not Available | Negative | 4589041 - 4590468 | 54540.4 |
| hypothetical protein | SAMN05421747_1433 | Not Available | Negative | 4590567 - 4590815 | 9348.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
