Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Parapedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Parapedobacter |
| Species | Parapedobacter composti |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 29 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | non-spore-forming |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1152102 bp
Thymine Count
1157457 bp
Guanine Count
1159480 bp
Cytosine Count
1152985 bp
Genome Length
4622024 bp
Protein-coding Genes
3993 genes
Non-Coding Genes
47 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| gliding motility-associated protein gldl | SAMN05421747_10128 | Not Available | Negative | 28437 - 29234 | 28874.3 |
| gliding motility-associated lipoprotein gldk/gliding motility-associated lipoprotein gldk,tigr03529 | SAMN05421747_10129 | Not Available | Negative | 29275 - 30579 | 49899.3 |
| uroporphyrinogen-iii synthase | SAMN05421747_10130 | Not Available | Negative | 30961 - 31734 | 29617.6 |
| protein of unknown function | SAMN05421747_10131 | Not Available | Negative | 31745 - 32698 | 36392.7 |
| protein of unknown function | SAMN05421747_10132 | Not Available | Negative | 32747 - 34126 | 51185.0 |
| methylated-dna-protein-cysteine methyltransferase related protein | SAMN05421747_10133 | Not Available | Positive | 34277 - 34618 | 12578.3 |
| cbs domain-containing protein | SAMN05421747_10134 | Not Available | Negative | 34615 - 35031 | 15254.7 |
| hypoxanthine phosphoribosyltransferase | SAMN05421747_10135 | Not Available | Negative | 35116 - 35655 | 20292.5 |
| transglycosylase | SAMN05421747_10136 | Not Available | Negative | 35662 - 37737 | 78399.0 |
| atp-binding protein involved in chromosome partitioning | SAMN05421747_10137 | Not Available | Positive | 37939 - 39000 | 37609.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
