Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Parapedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Parapedobacter |
| Species | Parapedobacter composti |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 29 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | non-spore-forming |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1152102 bp
Thymine Count
1157457 bp
Guanine Count
1159480 bp
Cytosine Count
1152985 bp
Genome Length
4622024 bp
Protein-coding Genes
3993 genes
Non-Coding Genes
47 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | SAMN05421747_1384 | Not Available | Negative | 4562709 - 4563263 | 21145.0 |
| hypothetical protein | SAMN05421747_1385 | Not Available | Negative | 4563250 - 4563579 | 12514.0 |
| helix-turn-helix domain-containing protein | SAMN05421747_1386 | Not Available | Negative | 4563572 - 4563847 | 10485.7 |
| hypothetical protein | SAMN05421747_1387 | Not Available | Negative | 4564253 - 4564999 | 28916.4 |
| hepn domain-containing protein | SAMN05421747_1388 | Not Available | Negative | 4565113 - 4565535 | 16259.7 |
| putative transposase | SAMN05421747_1389 | Not Available | Positive | 4565663 - 4565929 | 10182.5 |
| putative transposase | SAMN05421747_13810 | Not Available | Positive | 4565953 - 4566365 | 16739.6 |
| hypothetical protein | SAMN05421747_1391 | Not Available | Negative | 4566366 - 4566469 | 4049.18 |
| hypothetical protein | SAMN05421747_1392 | Not Available | Negative | 4566473 - 4567132 | 24991.9 |
| hypothetical protein | SAMN05421747_1393 | Not Available | Negative | 4567794 - 4568261 | 17699.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
