Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Parapedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Parapedobacter |
| Species | Parapedobacter composti |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 29 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | non-spore-forming |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1152102 bp
Thymine Count
1157457 bp
Guanine Count
1159480 bp
Cytosine Count
1152985 bp
Genome Length
4622024 bp
Protein-coding Genes
3993 genes
Non-Coding Genes
47 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| restriction endonuclease s subunit | SAMN05421747_1365 | Not Available | Negative | 4544864 - 4546156 | 49439.7 |
| protein gp37 | SAMN05421747_1366 | Not Available | Negative | 4546158 - 4546886 | 28371.5 |
| three-cys-motif partner protein | SAMN05421747_1367 | Not Available | Negative | 4546889 - 4548010 | 43696.3 |
| type i restriction enzyme, r subunit | SAMN05421747_1368 | Not Available | Negative | 4548012 - 4550795 | 107548.0 |
| hypothetical protein | SAMN05421747_1369 | Not Available | Negative | 4551139 - 4551409 | 10172.2 |
| hypothetical protein | SAMN05421747_1371 | Not Available | Negative | 4551887 - 4552180 | 11474.7 |
| 3-oxoacyl-[acyl-carrier-protein] synthase ii | SAMN05421747_1372 | Not Available | Negative | 4552207 - 4553451 | 44472.9 |
| protein of unknown function | SAMN05421747_1373 | Not Available | Negative | 4553448 - 4553663 | 8037.57 |
| uncharacterized domain 1-containing protein | SAMN05421747_1374 | Not Available | Negative | 4553664 - 4554095 | 16384.8 |
| hypothetical protein | SAMN05421747_1375 | Not Available | Negative | 4554098 - 4554820 | 28451.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
