Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Parapedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Parapedobacter |
| Species | Parapedobacter composti |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 29 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | non-spore-forming |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1152102 bp
Thymine Count
1157457 bp
Guanine Count
1159480 bp
Cytosine Count
1152985 bp
Genome Length
4622024 bp
Protein-coding Genes
3993 genes
Non-Coding Genes
47 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| uncharacterized conserved protein phnb, glyoxalase superfamily | SAMN05421747_13414 | Not Available | Negative | 4525770 - 4526273 | 18610.9 |
| hypothetical protein | SAMN05421747_13415 | Not Available | Negative | 4526414 - 4526830 | 15912.7 |
| hypothetical protein | SAMN05421747_1351 | Not Available | Negative | 4527017 - 4527304 | 10790.7 |
| hypothetical protein | SAMN05421747_1352 | Not Available | Negative | 4527592 - 4527876 | 11007.6 |
| hypothetical protein | SAMN05421747_1353 | Not Available | Negative | 4527931 - 4528146 | 8294.35 |
| hypothetical protein | SAMN05421747_1354 | Not Available | Positive | 4528736 - 4529062 | 12012.5 |
| hypothetical protein | SAMN05421747_1355 | Not Available | Positive | 4529103 - 4530569 | 54938.4 |
| ribosomal protein s18 acetylase rimi | SAMN05421747_1356 | Not Available | Negative | 4530720 - 4531841 | 42333.4 |
| hypothetical protein | SAMN05421747_1357 | Not Available | Negative | 4531960 - 4532457 | 19358.7 |
| hypothetical protein | SAMN05421747_1358 | Not Available | Negative | 4532664 - 4533146 | 18680.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
