Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Parapedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Parapedobacter |
| Species | Parapedobacter composti |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 29 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | non-spore-forming |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1152102 bp
Thymine Count
1157457 bp
Guanine Count
1159480 bp
Cytosine Count
1152985 bp
Genome Length
4622024 bp
Protein-coding Genes
3993 genes
Non-Coding Genes
47 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| camp-binding domain of crp or a regulatory subunit of camp-dependent protein kinases | SAMN05421747_1344 | Not Available | Negative | 4515855 - 4516424 | 22460.1 |
| hxlr-like helix-turn-helix | SAMN05421747_1345 | Not Available | Negative | 4516773 - 4517081 | 11596.2 |
| hypothetical protein | SAMN05421747_1346 | Not Available | Positive | 4517363 - 4517887 | 19760.9 |
| dna-binding response regulator, lytr/algr family | SAMN05421747_1347 | Not Available | Negative | 4517889 - 4518617 | 27278.3 |
| histidine kinase | SAMN05421747_1348 | Not Available | Negative | 4518614 - 4519717 | 42620.5 |
| surface antigen | SAMN05421747_1349 | Not Available | Negative | 4519720 - 4521777 | 75947.9 |
| 2-polyprenyl-6-methoxyphenol hydroxylase | SAMN05421747_13410 | Not Available | Negative | 4521950 - 4523365 | 53833.0 |
| dihydroanticapsin dehydrogenase | SAMN05421747_13411 | Not Available | Negative | 4523713 - 4524465 | 26329.8 |
| conserved hypothetical protein | SAMN05421747_13412 | Not Available | Negative | 4524603 - 4525058 | 17076.5 |
| hypothetical protein | SAMN05421747_13413 | Not Available | Negative | 4525076 - 4525660 | 21078.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
