Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Parapedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Parapedobacter |
| Species | Parapedobacter composti |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 29 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | non-spore-forming |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1152102 bp
Thymine Count
1157457 bp
Guanine Count
1159480 bp
Cytosine Count
1152985 bp
Genome Length
4622024 bp
Protein-coding Genes
3993 genes
Non-Coding Genes
47 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| tir domain-containing protein | SAMN05421747_13310 | Not Available | Negative | 4505985 - 4506668 | 24761.3 |
| hypothetical protein | SAMN05421747_13311 | Not Available | Negative | 4506733 - 4507608 | 33668.9 |
| hypothetical protein | SAMN05421747_13312 | Not Available | Negative | 4507943 - 4509070 | 43593.0 |
| hypothetical protein | SAMN05421747_13313 | Not Available | Negative | 4509236 - 4510273 | 38107.5 |
| hypothetical protein | SAMN05421747_13314 | Not Available | Negative | 4510277 - 4510555 | 10633.1 |
| hypothetical protein | SAMN05421747_13315 | Not Available | Positive | 4511405 - 4511653 | 9609.55 |
| methyltransferase domain-containing protein | SAMN05421747_13316 | Not Available | Positive | 4511631 - 4512362 | 28580.3 |
| fr47-like protein | SAMN05421747_1341 | Not Available | Negative | 4513351 - 4514052 | 26877.2 |
| uncharacterized membrane protein | SAMN05421747_1342 | Not Available | Negative | 4514270 - 4514719 | 16693.2 |
| acetyl esterase/lipase | SAMN05421747_1343 | Not Available | Negative | 4514814 - 4515752 | 35339.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
