Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Parapedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Parapedobacter |
| Species | Parapedobacter composti |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 29 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | non-spore-forming |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1152102 bp
Thymine Count
1157457 bp
Guanine Count
1159480 bp
Cytosine Count
1152985 bp
Genome Length
4622024 bp
Protein-coding Genes
3993 genes
Non-Coding Genes
47 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | SAMN05421747_13216 | Not Available | Positive | 4495546 - 4495995 | 17584.8 |
| hypothetical protein | SAMN05421747_1331 | Not Available | Positive | 4496124 - 4496454 | 12829.9 |
| hypothetical protein | SAMN05421747_1332 | Not Available | Positive | 4496539 - 4496904 | 13490.7 |
| susd family protein | SAMN05421747_1333 | Not Available | Negative | 4496975 - 4498342 | 51474.4 |
| tonb-linked outer membrane protein, susc/raga family | SAMN05421747_1334 | Not Available | Negative | 4498375 - 4501587 | 120458.0 |
| thiol-disulfide isomerase or thioredoxin | SAMN05421747_1335 | Not Available | Negative | 4501613 - 4502983 | 51512.1 |
| hypothetical protein | SAMN05421747_1336 | Not Available | Positive | 4503915 - 4504145 | 8943.83 |
| mannose-6-phosphate isomerase, cupin superfamily | SAMN05421747_1337 | Not Available | Positive | 4504129 - 4504467 | 12858.2 |
| hypothetical protein | SAMN05421747_1338 | Not Available | Positive | 4504525 - 4504926 | 15474.5 |
| homeodomain-like domain-containing protein | SAMN05421747_1339 | Not Available | Negative | 4504881 - 4505852 | 38117.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
