Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Parapedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Parapedobacter |
| Species | Parapedobacter composti |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 29 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | non-spore-forming |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1152102 bp
Thymine Count
1157457 bp
Guanine Count
1159480 bp
Cytosine Count
1152985 bp
Genome Length
4622024 bp
Protein-coding Genes
3993 genes
Non-Coding Genes
47 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| tigr01666 family membrane protein | SAMN05421747_13014 | Not Available | Negative | 4444334 - 4446562 | 84817.9 |
| hypothetical protein | SAMN05421747_13015 | Not Available | Positive | 4446711 - 4446869 | 5931.18 |
| hypothetical protein | SAMN05421747_13016 | Not Available | Positive | 4446874 - 4447071 | 7063.3 |
| hypothetical protein | SAMN05421747_13017 | Not Available | Positive | 4447146 - 4447916 | 28672.2 |
| phosphoenolpyruvate carboxylase | SAMN05421747_13018 | Not Available | Positive | 4448398 - 4450974 | 98839.7 |
| protein of unknown function | SAMN05421747_13019 | Not Available | Positive | 4451059 - 4451616 | 20208.9 |
| predicted dehydrogenase | SAMN05421747_13020 | Not Available | Positive | 4451650 - 4452681 | 39098.1 |
| polyphosphate kinase | SAMN05421747_13021 | Not Available | Positive | 4452780 - 4454843 | 80577.3 |
| exopolyphosphatase / guanosine-5'-triphosphate,3'-diphosphate pyrophosphatase | SAMN05421747_13022 | Not Available | Positive | 4454850 - 4455752 | 33513.6 |
| Trna-leu | Not Available | Not Available | Positive | 4455790 - 4455875 | Not Available |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
