Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Parapedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Parapedobacter |
| Species | Parapedobacter composti |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 29 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | non-spore-forming |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1152102 bp
Thymine Count
1157457 bp
Guanine Count
1159480 bp
Cytosine Count
1152985 bp
Genome Length
4622024 bp
Protein-coding Genes
3993 genes
Non-Coding Genes
47 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| transposase and inactivated derivatives | SAMN05421747_12922 | Not Available | Negative | 4428020 - 4428298 | 10678.9 |
| sulfatase-modifying factor enzyme 1 | SAMN05421747_12923 | Not Available | Negative | 4428322 - 4428990 | 25774.8 |
| formylglycine-generating enzyme, required for sulfatase activity, contains sumf1/fge domain | SAMN05421747_12924 | Not Available | Negative | 4429028 - 4430152 | 42893.4 |
| formylglycine-generating enzyme, required for sulfatase activity, contains sumf1/fge domain | SAMN05421747_12925 | Not Available | Negative | 4430165 - 4431364 | 46071.0 |
| hypothetical protein | SAMN05421747_12926 | Not Available | Negative | 4431567 - 4433228 | 61126.3 |
| sulfatase | SAMN05421747_12927 | Not Available | Negative | 4433385 - 4433999 | 23227.4 |
| putative transposase | SAMN05421747_12928 | Not Available | Negative | 4434118 - 4434270 | 5675.45 |
| Trna-asn | Not Available | Not Available | Positive | 4434373 - 4434449 | Not Available |
| uncharacterized conserved protein ydhg, yjbr/cyay-like superfamily, duf1801 family | SAMN05421747_1302 | Not Available | Positive | 4434730 - 4435089 | 13953.9 |
| uncharacterized membrane protein yoak, upf0700 family | SAMN05421747_1303 | Not Available | Negative | 4435191 - 4436015 | 30519.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
