Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Parapedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Parapedobacter |
| Species | Parapedobacter composti |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 29 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | non-spore-forming |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1152102 bp
Thymine Count
1157457 bp
Guanine Count
1159480 bp
Cytosine Count
1152985 bp
Genome Length
4622024 bp
Protein-coding Genes
3993 genes
Non-Coding Genes
47 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| protein of unknown function | SAMN05421747_12814 | Not Available | Positive | 4397288 - 4398184 | 33580.2 |
| septum formation initiator | SAMN05421747_12815 | Not Available | Negative | 4398275 - 4398568 | 11663.1 |
| gaf domain-containing protein | SAMN05421747_12816 | Not Available | Negative | 4398616 - 4399818 | 44491.8 |
| type ix secretion system membrane protein, porp/sprf family | SAMN05421747_12817 | Not Available | Negative | 4399896 - 4400795 | 31991.5 |
| gliding motility-associated c-terminal domain-containing protein | SAMN05421747_12818 | Not Available | Negative | 4400844 - 4405892 | 176034.0 |
| arac-type dna-binding protein | SAMN05421747_12819 | Not Available | Negative | 4406292 - 4407404 | 41482.8 |
| enolase | SAMN05421747_12820 | Not Available | Negative | 4407423 - 4408715 | 46217.6 |
| carbamoyl-phosphate synthase small subunit | SAMN05421747_12821 | Not Available | Negative | 4408837 - 4409955 | 40889.4 |
| hypothetical protein | SAMN05421747_12822 | Not Available | Positive | 4410387 - 4410565 | 6732.45 |
| hypothetical protein | SAMN05421747_1291 | Not Available | Negative | 4410655 - 4411416 | 29229.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
