Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Parapedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Parapedobacter |
| Species | Parapedobacter composti |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 29 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | non-spore-forming |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1152102 bp
Thymine Count
1157457 bp
Guanine Count
1159480 bp
Cytosine Count
1152985 bp
Genome Length
4622024 bp
Protein-coding Genes
3993 genes
Non-Coding Genes
47 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| methyltransferase domain-containing protein | SAMN05421747_101368 | Not Available | Positive | 500206 - 500964 | 28721.2 |
| predicted acyltransferase | SAMN05421747_101369 | Not Available | Positive | 500961 - 502172 | 45494.6 |
| small subunit ribosomal protein s15 | SAMN05421747_101370 | Not Available | Positive | 502320 - 502598 | 10593.9 |
| polyribonucleotide nucleotidyltransferase | SAMN05421747_101371 | Not Available | Positive | 502732 - 504867 | 78136.0 |
| alpha-1,2-mannosidase, putative | SAMN05421747_101372 | Not Available | Negative | 504937 - 507192 | 83813.9 |
| laci family transcriptional regulator | SAMN05421747_101373 | Not Available | Positive | 507305 - 508324 | 37850.6 |
| peptide-methionine (r)-s-oxide reductase/peptide methionine sulfoxide reductase msra/msrb | SAMN05421747_101374 | Not Available | Negative | 508281 - 508781 | 18556.0 |
| cytochrome c, mono-and diheme variants | SAMN05421747_101375 | Not Available | Positive | 509164 - 510450 | 46891.4 |
| prokaryotic molybdopterin-containing oxidoreductase family, iron-sulfur binding subunit | SAMN05421747_101376 | Not Available | Positive | 510498 - 513512 | 110560.0 |
| prokaryotic molybdopterin-containing oxidoreductase family, membrane subunit | SAMN05421747_101377 | Not Available | Positive | 513541 - 515022 | 56214.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
