Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Parapedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Parapedobacter |
| Species | Parapedobacter composti |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 29 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | non-spore-forming |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1152102 bp
Thymine Count
1157457 bp
Guanine Count
1159480 bp
Cytosine Count
1152985 bp
Genome Length
4622024 bp
Protein-coding Genes
3993 genes
Non-Coding Genes
47 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | SAMN05421747_1276 | Not Available | Positive | 4363928 - 4364311 | 14149.0 |
| hypothetical protein | SAMN05421747_1277 | Not Available | Positive | 4364340 - 4364543 | 7408.02 |
| helix-turn-helix domain-containing protein | SAMN05421747_1278 | Not Available | Negative | 4364580 - 4364819 | 9161.02 |
| hypothetical protein | SAMN05421747_1279 | Not Available | Negative | 4364855 - 4365079 | 8500.44 |
| tonb-linked outer membrane protein, susc/raga family | SAMN05421747_12710 | Not Available | Positive | 4365191 - 4369153 | 146466.0 |
| susd family protein | SAMN05421747_12711 | Not Available | Positive | 4369191 - 4370537 | 50246.3 |
| thiol-disulfide isomerase or thioredoxin | SAMN05421747_12712 | Not Available | Positive | 4370548 - 4371858 | 49573.9 |
| hypothetical protein | SAMN05421747_12713 | Not Available | Negative | 4371909 - 4372163 | 9204.91 |
| type iv pilus assembly protein pilq | SAMN05421747_12714 | Not Available | Positive | 4372712 - 4374649 | 71587.8 |
| hypothetical protein | SAMN05421747_12715 | Not Available | Positive | 4374658 - 4375890 | 44879.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
